Book Image

Python Data Analysis Cookbook

By : Ivan Idris
Book Image

Python Data Analysis Cookbook

By: Ivan Idris

Overview of this book

Data analysis is a rapidly evolving field and Python is a multi-paradigm programming language suitable for object-oriented application development and functional design patterns. As Python offers a range of tools and libraries for all purposes, it has slowly evolved as the primary language for data science, including topics on: data analysis, visualization, and machine learning. Python Data Analysis Cookbook focuses on reproducibility and creating production-ready systems. You will start with recipes that set the foundation for data analysis with libraries such as matplotlib, NumPy, and pandas. You will learn to create visualizations by choosing color maps and palettes then dive into statistical data analysis using distribution algorithms and correlations. You’ll then help you find your way around different data and numerical problems, get to grips with Spark and HDFS, and then set up migration scripts for web mining. In this book, you will dive deeper into recipes on spectral analysis, smoothing, and bootstrapping methods. Moving on, you will learn to rank stocks and check market efficiency, then work with metrics and clusters. You will achieve parallelism to improve system performance by using multiple threads and speeding up your code. By the end of the book, you will be capable of handling various data analysis techniques in Python and devising solutions for problem scenarios.
Table of Contents (23 chapters)
Python Data Analysis Cookbook
Credits
About the Author
About the Reviewers
www.PacktPub.com
Preface
Glossary
Index

Applying principal component analysis for dimension reduction


Principal component analysis (PCA), invented by Karl Pearson in 1901, is an algorithm that transforms data into uncorrelated orthogonal features called principal components. The principal components are the eigenvectors of the covariance matrix.

Sometimes, we get better results by scaling the data prior to applying PCA, although this is not strictly necessary. We can interpret PCA as projecting data to a lower dimensional space. Some of the principal components contribute relatively little information (low variance); therefore, we can omit them. We have the following transformation:

The result is the matrix TL, with the same number of rows as the original matrix but a lower number of columns.

Dimensionality reduction is, of course, useful for visualization and modeling and to reduce the chance of overfitting. In fact, there is a technique called Principal component regression (PCR), which uses this principle. In a nutshell, PCR...