Book Image

R Deep Learning Cookbook

By : PKS Prakash, Achyutuni Sri Krishna Rao
Book Image

R Deep Learning Cookbook

By: PKS Prakash, Achyutuni Sri Krishna Rao

Overview of this book

Deep Learning is the next big thing. It is a part of machine learning. It's favorable results in applications with huge and complex data is remarkable. Simultaneously, R programming language is very popular amongst the data miners and statisticians. This book will help you to get through the problems that you face during the execution of different tasks and Understand hacks in deep learning, neural networks, and advanced machine learning techniques. It will also take you through complex deep learning algorithms and various deep learning packages and libraries in R. It will be starting with different packages in Deep Learning to neural networks and structures. You will also encounter the applications in text mining and processing along with a comparison between CPU and GPU performance. By the end of the book, you will have a logical understanding of Deep learning and different deep learning packages to have the most appropriate solutions for your problems.
Table of Contents (17 chapters)
Title Page
Credits
About the Authors
About the Reviewer
www.PacktPub.com
Customer Feedback
Preface

Installing all three packages at once using Docker


Docker is a software-contained platform that is used to host multiple software or apps side by side in isolated containers to get better computing density. Unlike virtual machines, containers are built only using libraries and the settings required by any software but do not bundle the entire operating system, thus making it lightweight and efficient.

Getting ready

Setting up all three packages could be quite cumbersome depending on the operating system utilized. The following dockerfile code can be used to set up an environment with tensorflow, mxnet with GPU, and h2o installed with all the dependencies:

FROM chstone/mxnet-gpu:latest
MAINTAINER PKS Prakash <prakash5801>


# Install dependencies
RUN apt-get update && apt-get install -y
 python2.7 
 python-pip 
 python-dev 
 ipython 
 ipython-notebook 
 python-pip 
 default-jre


# Install pip and Jupyter notebook
RUN pip install --upgrade pip && 
 pip install jupyter

# Add R to Jupyter kernel 
RUN Rscript -e "install.packages(c('repr', 'IRdisplay', 'crayon', 'pbdZMQ'), dependencies=TRUE, repos='https://cran.rstudio.com')" && 
 Rscript -e "library(devtools); library(methods); options(repos=c(CRAN='https://cran.rstudio.com')); devtools::install_github('IRkernel/IRkernel')" && 
 Rscript -e "library(IRkernel); IRkernel::installspec(name = 'ir32', displayname = 'R 3.2')" 

# Install H2O
RUN Rscript -e "install.packages('h2o', dependencies=TRUE, repos='http://cran.rstudio.com')"

# Install tensorflow fixing the proxy port
RUN pip install tensorflow-gpu
RUN Rscript -e "library(devtools); devtools::install_github('rstudio/tensorflow')"

The current image is created on top of the chstone/mxnet-gpu Docker image.

Note

The chstone/mxnet-gpu is a docker hub repository at https://hub.docker.com/r/chstone/mxnet-gpu/.

How to do it...

Docker will all dependencies can be installed using following steps:

  1. Save the preceding code to a location with a name, say, Dockerfile.
  2. Using the command line, go to the file location and use the following command and it is also shown in the screenshot after the command:
docker run -t "TagName:FILENAME"

Building the docker image

  1. Access the image using the docker images command as follows:

View docker images

  1. Docker images can be executed using the following command:
docker run -it -p 8888:8888 -p 54321:54321 <<IMAGE ID>>

Running a Docker image

Here, the option -i is for interactive mode and -t is to allocate --tty. The option -p is used to forward the port. As we will be running Jupyter on port 8888 and H2O on 54321, we have forwarded both ports to accessible from the local browser.

There's more...

More options for Docker can be checked out using docker run --help.