Book Image

Data Analysis with R, Second Edition - Second Edition

Book Image

Data Analysis with R, Second Edition - Second Edition

Overview of this book

Frequently the tool of choice for academics, R has spread deep into the private sector and can be found in the production pipelines at some of the most advanced and successful enterprises. The power and domain-specificity of R allows the user to express complex analytics easily, quickly, and succinctly. Starting with the basics of R and statistical reasoning, this book dives into advanced predictive analytics, showing how to apply those techniques to real-world data though with real-world examples. Packed with engaging problems and exercises, this book begins with a review of R and its syntax with packages like Rcpp, ggplot2, and dplyr. From there, get to grips with the fundamentals of applied statistics and build on this knowledge to perform sophisticated and powerful analytics. Solve the difficulties relating to performing data analysis in practice and find solutions to working with messy data, large data, communicating results, and facilitating reproducibility. This book is engineered to be an invaluable resource through many stages of anyone’s career as a data analyst.
Table of Contents (24 chapters)
Title Page
Copyright and Credits
Packt Upsell
Contributors
Preface
Index

So how does mice come up with the imputed values?


Let's focus on the univariate case, where only one column contains missing data and we use all the other (completed) columns to impute the missing values before generalizing to a multivariate case.

mice actually has a few different imputation methods up its sleeve, each best suited for a particular use case. mice will often choose sensible defaults based on the data type (continuous, binary, non-binary categorical, and so on).

The most important method is what the package calls the norm method. This method is very much like stochastic regression. Each of the m imputations is created by adding a normal noise term to the output of a linear regression predicting the missing variable. What makes this slightly different than just stochastic regression repeated m times is that the norm method also integrates uncertainty about the regression coefficients used in the predictive linear model.

Recall that the regression coefficients in a linear regression...