-
Book Overview & Buying
-
Table Of Contents
-
Feedback & Rating
Deep Learning for Genomics
By :
Even though FNNs and CNNs are extremely popular for tackling problems in genomics, they both have limitations. Genomics is all about sequence data, so RNNs can play a key role in several genomics applications. In addition, RNNs can find long-range dependencies in the data, which is why RNNs are great for genomic applications. RNNs are currently being used in several genomics applications, such as constructing a genotype imputation and phenotype sequences prediction system, base-calling accuracy for nanopore sequencing data, genetic regulatory networks, predicting protein functions, and so on. We’ll quickly look at a few RNN-based applications in genomics in the following section.
DeepNano is a freely available base caller for the Oxford Nanopore Technology (ONT) sequencing platform (https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0178751). Base calling is particularly important for sequencing platforms...
Change the font size
Change margin width
Change background colour