6. Modifying Rasters and Analyzing Raster Time Series | Learning R for Geospatial Analysis

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Table Of Contents

Learning R for Geospatial Analysis

By : Michael Dorman

3.9 (7)

Learning R for Geospatial Analysis

3.9 (7)

By: Michael Dorman

Overview of this book

This book is intended for anyone who wants to learn how to efficiently analyze geospatial data with R, including GIS analysts, researchers, educators, and students who work with spatial data and who are interested in expanding their capabilities through programming. The book assumes familiarity with the basic geographic information concepts (such as spatial coordinates), but no prior experience with R and/or programming is required. By focusing on R exclusively, you will not need to depend on any external software—a working installation of R is all that is necessary to begin.

Preface

Preface

What this book covers

What you need for this book

Who this book is for

Conventions

Reader feedback

Customer support

Free Chapter

1. The R Environment

1. The R Environment

Installing R and using the command line

Coding with R beyond the command line

Evaluating expressions

Exploring the basic object types in R

Summary

2. Working with Vectors and Time Series

2. Working with Vectors and Time Series

Vectors – the basic data structures in R

Using functions with several parameters

Creating subsets of vectors

Dealing with missing values

Writing new functions

Working with dates and time series

Introducing graphical functions

Summary

3. Working with Tables

3. Working with Tables

Using the data.frame class to represent tabular data

Controlling code execution

Automated calculations using the apply family of functions

Inference from tables by joining, reshaping, and aggregating

Summary

4. Working with Rasters

4. Working with Rasters

Using the matrix and array classes

Data structures for rasters in the raster package

Subsetting rasters

Overlay and reclassification of rasters

Summary

5. Working with Points, Lines, and Polygons

5. Working with Points, Lines, and Polygons

Data structures for vector layers in R

Exploring vector layer properties and subsetting

Geometrical calculations on vector layers

Spatial relations between vector layers

Joining geometries with tabular data

Summary

6. Modifying Rasters and Analyzing Raster Time Series

6. Modifying Rasters and Analyzing Raster Time Series

Changing the spatial extent or resolution of rasters

Raster resampling and reprojection

Filtering and clumping

Topography-related calculations with elevation data

Aggregating spatio-temporal raster data

Summary

7. Combining Vector and Raster Datasets

7. Combining Vector and Raster Datasets

Creating rasters from vector layers

Creating vector layers from a raster

Extracting raster values based on vector layers

Summary

8. Spatial Interpolation of Point Data

8. Spatial Interpolation of Point Data

Spatially interpolating point data

Mapping the annual temperature in Spain

Summary

9. Advanced Visualization of Spatial Data

9. Advanced Visualization of Spatial Data

Plotting with ggplot2 and ggmap

Making 3D plots with lattice

Summary

A. External Datasets Used in Examples

A. External Datasets Used in Examples

B. Cited References

B. Cited References

Index

Index

Aggregating spatio-temporal raster data

Spatio-temporal data, such as MODIS images, time series, or meteorological records from several stations (see Chapter 3, Working with Tables) pose a challenge for analysis and visualization due to their three-dimensional nature. One approach to simplify such data is to perform aggregation in spatial and/or temporal dimensions (another approach to simplify spatio-temporal data is, for example, cluster analysis).

In this section, we will experiment with two approaches to aggregate the data held in the multiband raster r in order to get additional perspectives on the spatio-temporal behavior of NDVI within the geographic area this raster covers.

Note

More specialized classes and methods (including aggregation) for various types of spatio-temporal data are defined in the spacetime package. An overview of this package can be found in the introductory paper "spacetime: Spatio-Temporal Data in R" by its creator Pebesma E. 2012.

The time dimension

In our first...

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