Book Image

Mastering Parallel Programming with R

By : Simon R. Chapple, Terence Sloan, Thorsten Forster, Eilidh Troup
Book Image

Mastering Parallel Programming with R

By: Simon R. Chapple, Terence Sloan, Thorsten Forster, Eilidh Troup

Overview of this book

R is one of the most popular programming languages used in data science. Applying R to big data and complex analytic tasks requires the harnessing of scalable compute resources. Mastering Parallel Programming with R presents a comprehensive and practical treatise on how to build highly scalable and efficient algorithms in R. It will teach you a variety of parallelization techniques, from simple use of R’s built-in parallel package versions of lapply(), to high-level AWS cloud-based Hadoop and Apache Spark frameworks. It will also teach you low level scalable parallel programming using RMPI and pbdMPI for message passing, applicable to clusters and supercomputers, and how to exploit thousand-fold simple processor GPUs through ROpenCL. By the end of the book, you will understand the factors that influence parallel efficiency, including assessing code performance and implementing load balancing; pitfalls to avoid, including deadlock and numerical instability issues; how to structure your code and data for the most appropriate type of parallelism for your problem domain; and how to extract the maximum performance from your R code running on a variety of computer systems.
Table of Contents (13 chapters)

OpenCL


Open Computing Language (OpenCL) is an industry-standard framework for writing portable high-performance programs that are executed across heterogeneous computing platforms consisting of a mix of devices including CPU, GPU, Digital Signal Processors (DSP), and Field-Programmable Gate Arrays (FPGA). OpenCL platforms operate across laptops, desktops, supercomputers, and even mobile devices.

OpenCL was originally developed by Apple back in 2008, but has since migrated to an open standard API under the auspices of Khronos Group, of which Apple, Intel, NVIDIA, AMD, Google, Amazon, IBM, Microsoft, and many significant others in the computing industry are members.

In addition to OpenCL, Khronos oversees a set of related standards, most notably, the long-established Open Graphics Library (OpenGL), which defines a well-adopted API for high-performance 3D graphics rendering. Indeed, both OpenCL and OpenGL are designed to interoperate, enabling both efficient, generalized computation and the image...