Book Image

R Programming By Example

By : Omar Trejo Navarro
Book Image

R Programming By Example

By: Omar Trejo Navarro

Overview of this book

R is a high-level statistical language and is widely used among statisticians and data miners to develop analytical applications. Often, data analysis people with great analytical skills lack solid programming knowledge and are unfamiliar with the correct ways to use R. Based on the version 3.4, this book will help you develop strong fundamentals when working with R by taking you through a series of full representative examples, giving you a holistic view of R. We begin with the basic installation and configuration of the R environment. As you progress through the exercises, you'll become thoroughly acquainted with R's features and its packages. With this book, you will learn about the basic concepts of R programming, work efficiently with graphs, create publication-ready and interactive 3D graphs, and gain a better understanding of the data at hand. The detailed step-by-step instructions will enable you to get a clean set of data, produce good visualizations, and create reports for the results. It also teaches you various methods to perform code profiling and performance enhancement with good programming practices, delegation, and parallelization. By the end of this book, you will know how to efficiently work with data, create quality visualizations and reports, and develop code that is modular, expressive, and maintainable.
Table of Contents (12 chapters)

Measuring by profiling and benchmarking

There's a common saying which states that you can't change what you can't measure. Even though you can technically change your code's performance in R, you definitely won't be able to know whether a change is worth it if you don't measure it. In this section, we will introduce three tools you can use to measure your code: Rprof(), system.time(), and microbenchmark(). The first two are included in R, and the third one requires the microbenchmark package to be installed. The Rprof() tool is used to profile code, while system.time() and microbenchmark() are used to benchmark code.

  • Profiling means that you measure how much time a particular implementation is spending on each of its parts.
  • Benchmarking means that you compare the total amount of time to execute different implementations to compare them among themselves...