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Biostatistics with Python

Biostatistics with Python

By : Darko Medin
4.5 (4)
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Biostatistics with Python

Biostatistics with Python

4.5 (4)
By: Darko Medin

Overview of this book

This book leverages the author’s decade-long experience in biostatistics and data science to simplify the practical use of biostatistics with Python. The chapters show you how to clean and describe your data effectively, setting a solid foundation for accurate analysis and proficiency in biostatistical inference to help you draw meaningful conclusions from your data through hypothesis testing and effect size analysis. The book walks you through predictive modeling to harness the power of Python to create robust predictive analytics that can drive your research and professional projects forward. You'll explore clinical biostatistics, learn how to design studies, conduct survival analysis, and synthesize evidence from multiple studies with meta-analysis – skills that are crucial for making informed decisions based on comprehensive data reviews. The concluding chapters will enhance your ability to analyze biological variables, enabling you to perform detailed and accurate data analysis for biological research. This book's unique blend of biostatistics and Python helps you find practical solutions that make complex concepts easy to grasp and apply. By the end of this biostatistics book, you’ll have moved from theoretical knowledge to practical experience, allowing you to perform biostatistical analysis confidently and accurately.
Table of Contents (24 chapters)
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1
Part 1:Introduction to Biostatistics and Getting Started with Python
6
Part 2:Introduction to Python for Biostatistics – Methodology and Examples
12
Part 3:Clinical Study Design, Analysis, and Synthesizing Evidence
18
Part 4:Biological and Statistical Variables and Frameworks, and a Final Practical Project from the Field of Biology

Installing packages in Python

One of the ways you can install packages is by using Anaconda’s command prompt. Simply open the Anaconda Prompt from the start menu and type the following command:

pip install pandas

Here’s the output:

Figure 2.14 – Installing packages in Anaconda

Figure 2.14 – Installing packages in Anaconda

You can repeat the same process for the numpy package. To do so, run the following code in your command prompt:

 pip install numpy

Here’s the output:

Figure 2.15 – Installing the numpy package

Figure 2.15 – Installing the numpy package

Now, try running the following lines of code:

import pandas as pd
import numpy as np

If the preceding commands were successful, then these two lines of code will run without any errors and you can now use the pandas and numpy packages. Note that you may run into the following error:

import pandas as pd
Traceback (most recent call last):
  File "C:\Users\MEDIN\AppData\Local\Temp\ipykernel_13244...
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Biostatistics with Python
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