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Biostatistics with Python

Biostatistics with Python

By : Darko Medin
4.5 (4)
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Biostatistics with Python

Biostatistics with Python

4.5 (4)
By: Darko Medin

Overview of this book

This book leverages the author’s decade-long experience in biostatistics and data science to simplify the practical use of biostatistics with Python. The chapters show you how to clean and describe your data effectively, setting a solid foundation for accurate analysis and proficiency in biostatistical inference to help you draw meaningful conclusions from your data through hypothesis testing and effect size analysis. The book walks you through predictive modeling to harness the power of Python to create robust predictive analytics that can drive your research and professional projects forward. You'll explore clinical biostatistics, learn how to design studies, conduct survival analysis, and synthesize evidence from multiple studies with meta-analysis – skills that are crucial for making informed decisions based on comprehensive data reviews. The concluding chapters will enhance your ability to analyze biological variables, enabling you to perform detailed and accurate data analysis for biological research. This book's unique blend of biostatistics and Python helps you find practical solutions that make complex concepts easy to grasp and apply. By the end of this biostatistics book, you’ll have moved from theoretical knowledge to practical experience, allowing you to perform biostatistical analysis confidently and accurately.
Table of Contents (24 chapters)
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1
Part 1:Introduction to Biostatistics and Getting Started with Python
6
Part 2:Introduction to Python for Biostatistics – Methodology and Examples
12
Part 3:Clinical Study Design, Analysis, and Synthesizing Evidence
18
Part 4:Biological and Statistical Variables and Frameworks, and a Final Practical Project from the Field of Biology

Performing descriptive statistics analysis in Python

As shown in Figure 3.11, the missing values have the removed, the species name has been corrected, and the first row has been removed. This means that the df object is now clean of any invalid data and can be used for further analysis.

The next step is essential and is called EDA:

#Perform the descriptive statistics in Iris dataset
df.describe()

Here’s the output:

Out[2]:
       Petal_width  Petal_length  Sepal_width  Sepal_length
count   144.000000    144.000000   144.000000    144.000000
mean      1.239583      3.854167     3.045139      5.881944
std       0.751336      1.736078    ...
CONTINUE READING
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Biostatistics with Python
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