Book Image

IPython Interactive Computing and Visualization Cookbook - Second Edition

By : Cyrille Rossant
Book Image

IPython Interactive Computing and Visualization Cookbook - Second Edition

By: Cyrille Rossant

Overview of this book

Python is one of the leading open source platforms for data science and numerical computing. IPython and the associated Jupyter Notebook offer efficient interfaces to Python for data analysis and interactive visualization, and they constitute an ideal gateway to the platform. IPython Interactive Computing and Visualization Cookbook, Second Edition contains many ready-to-use, focused recipes for high-performance scientific computing and data analysis, from the latest IPython/Jupyter features to the most advanced tricks, to help you write better and faster code. You will apply these state-of-the-art methods to various real-world examples, illustrating topics in applied mathematics, scientific modeling, and machine learning. The first part of the book covers programming techniques: code quality and reproducibility, code optimization, high-performance computing through just-in-time compilation, parallel computing, and graphics card programming. The second part tackles data science, statistics, machine learning, signal and image processing, dynamical systems, and pure and applied mathematics.
Table of Contents (19 chapters)
IPython Interactive Computing and Visualization CookbookSecond Edition
Contributors
Preface
Index

Implementing an efficient rolling average algorithm with stride tricks


Stride tricks can be useful for local computations on arrays, when the computed value at a given position depends on the neighboring values. Examples include dynamical systems, digital filters, and cellular automata.

In this recipe, we will implement an efficient rolling average algorithm (a particular type of convolution-based linear filter) with NumPy stride tricks. A rolling average of a 1D vector contains, at each position, the average of the elements around this position in the original vector. Roughly speaking, this process filters out the noisy components of a signal so as to keep only the slower components.

How to do it...

The idea is to start from a 1D vector, and make a virtual 2D array where each line is a shifted version of the previous line. When using stride tricks, this process is very efficient as it does not involve any copy.

  1. Let's generate a 1D vector:

    >>> import numpy as np
        from numpy.lib.stride_tricks...